Signature	SharedGeneNum	SharedGenes	AvgPval	ColonC_M13 Chr9_UniqueNum	ColonC_M13 Chr9_pVal	ColonC_M13 Chr9_Unique	ColonC_M2 Chr17q11-12,21-25_UniqueNum	ColonC_M2 Chr17q11-12,21-25_pVal	ColonC_M2 Chr17q11-12,21-25_Unique
G2_M transition of mitotic cell cycle [GoID:GO:0000086; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000250740026205	13	0.000208283956149	CDK5RAP2|CEP78|CNTRL|DCTN3|HAUS6|MELK|ODF2|PPP1CB|PSMB7|PSMD5|SSNA1|TUBA4A|TUBB4B	13	0.000293196096261	BRCA1|CSNK1D|DBF4B|PPM1D|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|TUBG1|ZNF830
Human Breast_Dairkee04_479genes (15260889-TableS2a)	0		0.000147138575922	27	1.84096027027e-10	BARD1|CIZ1|CKS2|CTNNAL1|DPM2|GTF3C4|HIST3H2A|MELK|MRPL41|MRPS2|ODF2|PAXX|PHF2|PMPCA|POLE3|PPP6C|PSMD5|RABL6|RAD23B|SLC25A25|SSNA1|STOML2|TMEM38B|TPRN|WDR5|WDR34|ZDHHC12	17	0.000294276967747	ACLY|BIRC5|BRCA1|CASC3|CDC6|COASY|DANCR|EIF4A3|FLOT2|FOXK2|MRPL38|RNF135|SLC25A10|TBCD|TK1|TOP2A|TUBG1
Human HeadandNeck_Jarvinen06_739genes (16715129-SuppTable2)	0		0.000100348961789	46	1.09788121814e-15	AGPAT2|APTX|ATP6V1G1|AUH|BRD3|C5|C9ORF16|CIZ1|CKS2|COQ4|CRAT|DDX31|FAM120A|FXN|GOLGA1|GTF3C4|GTF3C5|GYG1|IARS|KYAT1|MELK|MRPS2|NDUFA8|ODF2|PDCL|PIP5K1B|PLGRKT|PMPCA|PPP1R26|PPP6C|PRRC2B|PUM3|RABL6|RALGDS|RBM18|RC3H2|SLC35D2|SMU1|SPTLC1|SURF1|SYK|TJP2|TRUB2|TSC1|URM1|ZBTB43	26	0.000200697923577	APPBP2|C17ORF80|CANT1|CENPX|COG1|DCXR|DUS1L|EXOC7|FAM104A|GGA3|GRB2|HGS|ICA1L|JMJD6|MRPL58|MRPS7|NOTCH1|NT5C|NUP85|OXLD1|PCYT2|PPM1D|PRPSAP1|SLC38A10|SPAG9|TK1
WEI_MYCN_TARGETS_WITH_E_BOX	0		7.57578249624e-05	28	0.000144539607734	APTX|ARPC5L|C9ORF40|C9ORF78|CARNMT1|CDC42|CEP78|DOLK|EXOSC2|EXOSC3|FANCC|GTF3C4|HAUS6|MRPL41|MRPL50|MRPS2|POLE3|PUM3|RABEPK|RCL1|SIGMAR1|SMC2|TJP2|TMEM38B|TOMM5|UBQLN1|VCP|ZMYND19	32	6.97604219088e-06	ACLY|BIRC5|CANT1|CCDC137|CDC6|DUSP14|DYNLL2|FASN|GOSR2|GRB2|HGS|HNRNPDL|KPNB1|MRPL27|MRPL58|MRPS23|NME1-NME2|NMT1|NOL11|PHB|PNPO|PRR15L|PSMD12|PSME3|RAD51C|SFXN4|SLC25A10|SLC25A39|SLC35B1|SRSF7|TMEM97|UTP18
cell cycle G2_M phase transition [GoID:GO:0044839; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000489362688074	13	0.000408743071214	CDK5RAP2|CEP78|CNTRL|DCTN3|HAUS6|MELK|ODF2|PPP1CB|PSMB7|PSMD5|SSNA1|TUBA4A|TUBB4B	13	0.000569982304934	BRCA1|CSNK1D|DBF4B|PPM1D|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|TUBG1|ZNF830
endopeptidase complex [GoID:GO:1905369; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS]	0		0.000512644187414	7	0.000105876998811	ALAD|KIAA0368|PSMB7|PSMD5|RAD23B|UBQLN1|VCP	6	0.000919411376017	PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3
mitotic cell cycle [GoID:GO:0000278; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|IPI|ISS|NAS|TAS]	0		8.98941025201e-05	32	0.00016820390225	ABL1|ANAPC2|CDC26|CDC42|CDK5RAP2|CEP78|CKS2|CNTRL|DCTN3|E2F8|EML4|FBXW5|GOLGA2|HAUS6|MELK|NEK6|NUP188|NUP214|ODF2|POLE3|PPP1CB|PPP6C|PSMB7|PSMD5|PTPN3|SAPCD2|SMC2|SMC5|SSNA1|TUBA4A|TUBB3|TUBB4B	36	1.15843027902e-05	AATF|ANAPC11|ATAD5|BECN1|BIRC5|BRCA1|CDC6|CDC27|CDK11B|CSNK1D|DBF4B|KPNB1|NLE1|NUP85|POLDIP2|PPM1D|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|RPS6KB1|RPTOR|SIRT7|SLC9A3R1|SPAG5|STAT5B|STRADA|TBCD|TOM1L1|TOP2A|TUBG1|ZNF207|ZNF830
mitotic cell cycle phase transition [GoID:GO:0044772; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000494815985818	20	0.000611911903929	ANAPC2|CDC26|CDK5RAP2|CEP78|CKS2|CNTRL|DCTN3|E2F8|HAUS6|MELK|NEK6|ODF2|POLE3|PPP1CB|PPP6C|PSMB7|PSMD5|SSNA1|TUBA4A|TUBB4B	21	0.000377720067707	ANAPC11|ATAD5|BRCA1|CDC6|CDC27|CSNK1D|DBF4B|PPM1D|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|RPS6KB1|RPTOR|SIRT7|TUBG1|ZNF207|ZNF830
mitotic cell cycle process [GoID:GO:1903047; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|IPI|ISS|NAS|TAS]	0		0.000288294751895	28	0.000207191611084	ANAPC2|CDC26|CDC42|CDK5RAP2|CEP78|CKS2|CNTRL|DCTN3|E2F8|FBXW5|GOLGA2|HAUS6|MELK|NEK6|NUP188|NUP214|ODF2|POLE3|PPP1CB|PPP6C|PSMB7|PSMD5|SAPCD2|SMC2|SMC5|SSNA1|TUBA4A|TUBB4B	28	0.000369397892707	ANAPC11|ATAD5|BECN1|BIRC5|BRCA1|CDC6|CDC27|CSNK1D|DBF4B|KPNB1|NUP85|PPM1D|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|RPS6KB1|RPTOR|SIRT7|SPAG5|TOM1L1|TOP2A|TUBG1|ZNF207|ZNF830
nucleolus [GoID:GO:0005730; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000101291454424	35	2.76848590212e-06	ABL1|AGTPBP1|ANP32B|APTX|DCAF17|DCTN3|DDX31|E2F8|EDF1|ELP1|EXOSC2|EXOSC3|FANCG|GLE1|HINT2|IPPK|MED27|NFX1|NOL8|PHF2|POLR1E|PPP1CB|PPP1R26|PUM3|RCL1|REXO4|RNF20|SAPCD2|SETX|SMC2|SURF2|SURF6|TEX10|TTF1|XPO1	31	0.000199814422945	AATF|ACACA|ANAPC11|BCAS3|CCDC137|COIL|DDX52|EIF4A3|FTSJ3|GRB2|JMJD6|JPT1|MED1|MIF4GD|NARF|NF1|NLE1|NOL11|RDM1|RPL23|SIRT7|SRP68|SUZ12|THAP2|TNFAIP1|TOP2A|TSEN54|USP36|UTP6|UTP18|ZNF207
peptidase complex [GoID:GO:1905368; evidenceTypes:IBA|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	0		0.000557348454677	7	0.000499174584735	ALAD|KIAA0368|PSMB7|PSMD5|RAD23B|UBQLN1|VCP	7	0.000615522324619	ATXN7L3|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3
proteasome complex [GoID:GO:0000502; evidenceTypes:IBA|IDA|IEA|ISS|NAS]	0		0.000470624485731	7	9.56763161791e-05	ALAD|KIAA0368|PSMB7|PSMD5|RAD23B|UBQLN1|VCP	6	0.000845572655282	PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3
protein catabolic process [GoID:GO:0030163; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|IPI|ISS|NAS|TAS]	0		9.2657644784e-05	29	0.000103844533122	ABHD17B|ALAD|ANAPC2|ARRDC1|BARD1|CDC26|CDC42|CLTA|FBXW5|KIAA0368|MAN1B1|POMT1|PSMB7|PSMD5|PTPN3|RAD23B|RNF20|RNF38|SEC22B|SEC61B|TOR1A|TRAF2|TRIM32|UBAP1|UBE2R2|UBQLN1|USP20|VCP|XPO1	30	8.14707564459e-05	ANAPC11|AP2B1|CCDC47|CDC27|CSNK1D|GGA3|HGS|KCTD2|MVB12B|NPLOC4|NSF|PHB|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RMND5B|RPL23|SDF2|SNF8|SPOP|SUMO2|TLK2|TNFAIP1|TOM1L1|UBE2Z|USP36|VPS25
protein modification by small protein conjugation [GoID:GO:0032446; evidenceTypes:EXP|IBA|IDA|IEA|IGI|IMP|IPI|ISS|NAS|TAS]	0		0.00023362346029	30	0.000255142718301	ABL1|ANAPC2|ARRDC1|ASB6|BARD1|CDC26|CDC42|DCAF12|DCAF17|DNAJA1|DTX2|FBXW2|FBXW5|FBXW8|GOLGA2|MED27|NUP188|NUP214|PSMB7|PSMD5|RC3H2|RNF20|RNF38|RRAGA|TRAF2|TRIM32|UBAC1|UBE2R2|UBQLN1|VCP	31	0.000212104202278	ANAPC11|BIRC5|BLMH|BRCA1|CDC27|CENPX|DCAF7|FBXL20|MED1|NPEPPS|NUP85|PCGF2|PEX12|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RMND5B|RNF135|RNFT1|RPL23|SOCS7|SPOP|SUMO2|SUZ12|TNFAIP1|TOP2A|TRIM37|UBE2Z
protein ubiquitination [GoID:GO:0016567; evidenceTypes:EXP|IBA|IDA|IEA|IGI|IMP|IPI|ISS|NAS|TAS]	0		0.000352720597438	28	0.00025445074006	ABL1|ANAPC2|ARRDC1|ASB6|BARD1|CDC26|CDC42|DCAF12|DCAF17|DNAJA1|DTX2|FBXW2|FBXW5|FBXW8|GOLGA2|MED27|PSMB7|PSMD5|RC3H2|RNF20|RNF38|RRAGA|TRAF2|TRIM32|UBAC1|UBE2R2|UBQLN1|VCP	28	0.000450990454815	ANAPC11|BIRC5|BLMH|BRCA1|CDC27|CENPX|DCAF7|FBXL20|MED1|NPEPPS|PCGF2|PEX12|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RMND5B|RNF135|RNFT1|RPL23|SOCS7|SPOP|SUZ12|TNFAIP1|TRIM37|UBE2Z
regulation of G2_M transition of mitotic cell cycle [GoID:GO:0010389; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|TAS]	0		0.000240907919408	11	0.000360905644273	CDK5RAP2|CEP78|CNTRL|DCTN3|HAUS6|ODF2|PSMB7|PSMD5|SSNA1|TUBA4A|TUBB4B	12	0.000120910194542	BRCA1|CSNK1D|DBF4B|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|TUBG1|ZNF830
regulation of cell cycle G2_M phase transition [GoID:GO:1902749; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|TAS]	0		0.000534028616331	11	0.000782427056695	CDK5RAP2|CEP78|CNTRL|DCTN3|HAUS6|ODF2|PSMB7|PSMD5|SSNA1|TUBA4A|TUBB4B	12	0.000285630175968	BRCA1|CSNK1D|DBF4B|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RAD51C|TUBG1|ZNF830
